Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKKLILGLVMMMALFSLAACGGGGDVVKTDSGDVTKDELYDAMKDKYGSEFVQQLTFEKILGDKYKVSDEDVDKKFNEYKSQYGDQFSAVLTQSGLTEKSFKSQLKYNLLVQKATEANTDTSDKTLKKYYETWQPDITVSHILVADENKAKEVEQKLKDGEKFADLAKEYSTDTATKDNGGQLAPFGPGKMDPAFEKAAYALKNKGD-----ISAPVKTQYGYHIIQMDKPATKTTFEKDKKAVKASYLESQLTTENMQKTLKKEYKDANVKVEDKDLKDAFKDFDGSSSSDSDSSK |
| 1EQ3 Chain:A ((38-128)) | -----------------------------------------------------------------------------------------------------------------------------------------VKVRHILCEKHGKIMEAMEKLKSGMRFNEVAAQYSEDKARQ--GGDLGWMTRGSMVGPFQEAAFALPVSGMDKPVFTDPPVKTKFGYHIIMVE-------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1EQ3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -31435 for 573 contacts (-54.9/contact) +
2D Compatibility (PS) -9916 + (NN) -9857 + (LL) 11792
1D Compatibility (HY) -7600 + (ID) 1800
Total energy: -48816.0 ( -85.19 by residue)
QMean score : 0.583
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