Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKKYGILALALTAALTLSACGGKEEPEAANQKVQTITVGTGTQFPNVCFLDENGKLTGYDVELVKEIDKRLPGYKFKFKTMDFSNLLVSLGAGKVDIVAHQMEKSKEREKKFLFNDVAYNNFPLQLTVLDSNNSINSTKDLAGKRVITSATSNGALVLKKINEEQGNNFEIAYEGQGSNDTANQLKTGRADATISTPFAVDFQNKTSAIKEK------VVGDVLSNAKVYFMLGKDETKLSKKVDEALQSIIDDGTLKKLSEKWLGADYSKEQY
3VVF Chain:A ((38-256))------------------------------------IRIGTEGAFPPFNYFDERNQLTGFEVDLGNAIAERL-GLKPRWIAQSFDTLLIQLNQGRFDFVIASHGITEERARAVDFTNPHYCTGGV---IVSRKGGPRTAKDLQGKVV---GVQVGTTYMEAAQKIPGIKEVRTY--QRDPDALQDLLAGRIDTWITDRFVA-----KEAIKERKLENTLQVGELVFQERVAMAVAKGNKSLLDALNRALAELMQDGTYARISQKWFGED------


General information:
TITO was launched using:
RESULT:

Template: 3VVF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -78925 for 1771 contacts (-44.6/contact) +
2D Compatibility (PS) -23078 + (NN) -6167 + (LL) 3876
1D Compatibility (HY) -14000 + (ID) 3200
Total energy: -121494.0 ( -68.60 by residue)
QMean score : 0.534

(partial model without unconserved sides chains):
PDB file : Tito_3VVF.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3VVF-query.scw
PDB file : Tito_Scwrl_3VVF.pdb: