Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNVLVIGANGKIGRLLVEKLAMEKGFFVRAMVRKAEQVSELEKLGAKP---IIADLKK--DFHYAYDEIEAVIFTAGSGGHTPASETVNIDQNGAIKAIETAKEKGVRRFI-IVSSYGADNPENGPESLAHYLKAKQAADEELKKSGLDYTIVRPVGLSDDPATGK-IAEVSGK-PKTNIPRADVADFISEALSEKSSFYKTYTIESGDTPIKQFFN
1HE5 Chain:A ((6-190))
--IAIFGATGQTG-LTTLAQAVQAGYEVTVLVRDS---SRLPSEGPRPAHVVVGDVLQAADVDKTVAGQDAVIVLLGTRNDLSPTTVMS---EGARNIVAAMKAHGVDKVVACTSAFLLWDPTKVPPRLQAVTDDHIRMHKVLRESGLKYVAVMPPHIGDQPLTGAYTVTLDGRGPSRVISKHDLGHFMLRCLT-----------------------
General information:
TITO was launched using:
RESULT:
Template:
1HE5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -78488 for 1376 contacts (-57.0/contact) +
2D Compatibility (PS) -20139 + (NN) -17297 + (LL) 2004
1D Compatibility (HY) -9200 + (ID) 2300
Total energy: -125420.0 ( -91.15 by residue)
QMean score : 0.558
(partial model without unconserved sides chains):
PDB file :
Tito_1HE5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HE5-query.scw
PDB file :
Tito_Scwrl_1HE5.pdb
: