Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVEKQSALESKARSWLIERGVEIDDIAELVLFLQQKYHPGLELEICRQNVEHVLRKREVQNAVLTGIQLDVMAEKGELVQPLQNIISADEGLYGVDEILALSIVNVYGSIGFTNYGYIDKVKPGILAKLNEHDGIAVHTFLDDIVGAIAAAAASRLAHSYHDDIVN
4IQ4 Chain:A ((71-155))
---------------------------------------GYDYDTFAADLNTVLETLDLQDAVLVGFSMGT----GEVAR----------------------YVSSYGTARIAAVAFLASLEPFLLKTDDNPDGAAPQEFFDGIVAAVKA----------------
General information:
TITO was launched using:
RESULT:
Template:
4IQ4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -37624 for 494 contacts (-76.2/contact) +
2D Compatibility (PS) -8780 + (NN) -1378 + (LL) 6960
1D Compatibility (HY) -7600 + (ID) 1200
Total energy: -49622.0 ( -100.45 by residue)
QMean score : 0.251
(partial model without unconserved sides chains):
PDB file :
Tito_4IQ4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4IQ4-query.scw
PDB file :
Tito_Scwrl_4IQ4.pdb
: