Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKHIVLIVVACITVIAVFMYIVQINNSELKYQNRAQIKIASQMASQNEQTDNSIVSEITYK
3J2W Chain:E ((34-41))
-----ILIVVLCV-------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3J2W.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2829 for 22 contacts (-128.6/contact) +
2D Compatibility (PS) -580 + (NN) 2548 + (LL) 5220
1D Compatibility (HY) -2800 + (ID) 250
Total energy: 1309.0 ( 59.50 by residue)
QMean score : 0.511
(partial model without unconserved sides chains):
PDB file :
Tito_3J2W.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3J2W-query.scw
PDB file :
Tito_Scwrl_3J2W.pdb
: