Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LAKIKVMSIFGTRPEAIKMAPLVLALEKEPETFESTVVITAQHREM-LDQVLEIFD---IKPDIDLDIMKKGQTLAEITSRVMNGINEVIAAENPDIVLVHGDTTTSFAAGLATFYQQKMLGHVEAGLRTWNKYSPFPEEMNRQLTGVMADIHFSPTKQAKENLLAEGKDPATIFVTGNTAIDALKTTVQKDYHHPILENLG--DNRLILMTAHRRENLG-EPMQGMFEAVREIVESREDTELVYPMHLNPAVREKAMAILGGHERIHLIEPLDAIDFHNFLR---KSYLVFTDSGGVQEEAPGMGVPVLVLRDTTERPEGIEAGTLKLIGTNKENLIKEALDLLDNKESHDKMAQAANP-YGD-GFAANRILAAIKSHFEETDRPEDFIV |
| 4HWG Chain:A ((10-379)) | ---LKVMTIVGTRPELIKLCCVISEFDKHTK---HILVHTGQNYAYELNQVF--FDMGIRKPDYFLEV--AADNTAKSIGLVIEKVDEVLEKEKPDAVLFYGDTNSCLSA-IAAKRRKIPIFHMEAGNRCFDQ--RVPEEINRKIIDHISDVNITLTEHARRYLIAEGLPAELTFKSGSHMPEVLDRFMPKILKSDILDKLSLTPKQYFLISSHRE----KNNLKELLNSLQMLIKEY-NFLIIFSTH--PRTKKRLEDLEGFKELGDKIRFLPAFSFTDYVKLQMNAFCILSDSGTITEEASILNLPALNIREAHERPEGMDAGTLIMSGFKAERVL-QAVKTITEEHDNNKRTQGLVPDYNEAGLVSKKILRIVLSYVDYINR------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4HWG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -124297 for 2933 contacts (-42.4/contact) +
2D Compatibility (PS) -38826 + (NN) -21746 + (LL) 1852
1D Compatibility (HY) -26000 + (ID) 5150
Total energy: -214167.0 ( -73.02 by residue)
QMean score : 0.447
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