Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPIVNMTDMLKKALAGKYAVGQFNINNLEWTQAILKAAEAEKAPVILGVSEGAAKYMGGFKTVVKMTEGLVE---DLKITVPVAIHLDHGSSFDSCKAAIDAGFSSVMIDGSHHPIDENIAMTKQVVDYAHAKGVSVEAEIGTVGGDEDGVTGGINYA---DPQECLRVVKEANIDALAAALGSVHG--PYHGEPVLGFDEMKEISELTGAPLVLHGGSGIPEH---------------------QIKKAIELGHSKINVNTECQIVWTAAVREKLATDDKV-YDPRKVIGPGVDAIIKTVTEKIQEFGSNGKA |
| 3C56 Chain:A ((2-306)) | --LVKGNEILLKAHKEGYGVGAFNFVNFEMLNAIFEAGNEENSPLFIQASEGAIKYMG-----IDMAVGMVKIMCERYPHIPVALHLDHGTTFESCEKAVKAGFTSVMIDASHHAFEENLELTSKVVKMAHNAGVSVEAELGRLMGI----------AVLVNPKEAEQFVKESQVDYLAPAIGTSHGAFKFKGEPKLDFERLQEVKRLTNIPLVLHGASAIPDNVRKSYLDAGGDLKGSKGVPFEFLQESVKGGINKVNTDTDLRIAFIAEVR-KVANEDKSQFDLRKFFSPAQLALKNVVKERMKLLGSANK- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3C56.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -116331 for 2298 contacts (-50.6/contact) +
2D Compatibility (PS) -29939 + (NN) -15072 + (LL) 556
1D Compatibility (HY) -22800 + (ID) 5900
Total energy: -189486.0 ( -82.46 by residue)
QMean score : 0.600
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