Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTANQMERKKVTIHITNVIRQMDAEEKSDMSVSGVFYRDKGNRYLHYEEKQLAGTIRTVLKIADNELLLMRSGAVNMRMHFFRDNRRSTASVDSGAGKLQLESELVSMEELYENKPDVLSEVAFQYDLLSHGEYIGSYTVLMKIEEDAE
4ELO Chain:A ((224-285))
---------------------------------------------------------------------FRRAGYRLGMHHFRDGDAGNLALVTGAGLLKTSKNLAAATRFLTY---LLSPQAQQYFVGNIGEY---------------
General information:
TITO was launched using:
RESULT:
Template:
4ELO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -710 for 253 contacts (-2.8/contact) +
2D Compatibility (PS) -6479 + (NN) -1564 + (LL) 7064
1D Compatibility (HY) -3200 + (ID) 950
Total energy: -5839.0 ( -23.08 by residue)
QMean score : -0.094
(partial model without unconserved sides chains):
PDB file :
Tito_4ELO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4ELO-query.scw
PDB file :
Tito_Scwrl_4ELO.pdb
: