Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRTTYMAKPGEVERKWYVIDATGVSLGRLSSEVASILRGKNKPQFTPHIDTGDFVIIINAGKIGLTGKKATDKIYYRHSQYPGGLKSRTAGEMRTNNPEKLLELSIKGMLPKNSLGRQLFKKLHVYGGSEHEHAAQQPEVYELRG |
| 2J28 Chain:J ((3-139)) | ---TFTAKPETVKRDWYVVDATGKTLGRLATELARRLRGKHKAEYTPHVDTGDYIIVLNADKVAVTGNKRTDKVYYHHTGHIGGIKQATFEEMIARRPERVIEIAVKGMLPKGPLGRAMFRKLKVYAGNEHNHAAQQPQV----- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2J28.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 21795 for 747 contacts (29.2/contact) +
2D Compatibility (PS) -13813 + (NN) 828 + (LL) 660
1D Compatibility (HY) 6000 + (ID) 250
Total energy: 15220.0 ( 20.37 by residue)
QMean score : 0.118
|
|
|