Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSIPSFLKLVEIQTKIASVFPFMLGTLFVVYQYDMFKPINTLIIFGSMLIFDLTTTAINNYMDYRKATDNHDYDYRTTSNVIGQEQIPVRTVIITIFLMFFIATGLGVWLVFRTDLLVLLIGFVCFCIGILYTFGPVPLSRMPLGEIFSGVTMGFGIFFLAVYVNAYDAGIANLLWQGEMVTIQFNLIEIIRIGVVSLPCIFTIANIMLANNLCDLDED-----------IRNHRYTLPYYIGRKMGVLLFNTLYYASFLAVVVSVAINFLHPIMLLSLITIYPVYRNLVKFNKEQVKSKTFVIGIRNFVLINATLTILMAVSVVLQQLT |
1RQJ Chain:A ((216-260)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYPALLGLEQAR---------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1RQJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -9003 for 176 contacts (-51.2/contact) +
2D Compatibility (PS) -3477 + (NN) -970 + (LL) 26356
1D Compatibility (HY) -400 + (ID) 250
Total energy: 12256.0 ( 69.64 by residue)
QMean score : 0.255
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