Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKLKKVAMGITVVMASSLLLVGCGSSDDSSKDKKSTDTKQTETKKTAKTDGTMTDGTYKLEEKNFDDKGWKGFMSIEVKDGKITKANYDYKNKDGKLKSEDADYEKAMKDKVGTGPQEYLKQLSDSLVKNQSAASVEVVSGATHSSDAFINYANQLIQAAQ------KADTTTISINNLAKMEDGTYKLEEQNYAHGYRVVFSMDVKDGKITKSDYNYVDKDGKLKSDDADYEKNMKAKSGTGPKEYIPALNKSLVEKQDVAAVDTVSGATNSSNQFKIYAAQLQNAAQNGNTDTIKVYNLVEAE
4GFR Chain:A ((341-412))----------------------------------------------------------------------------------------------------------------------------DGFVETPSGKSFELLIQSPNGWTDFNNTVQLAVEQLQEVGIKAKARTPEFAVYNQAMLE-GTYDVAYTNYFHG------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4GFR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 15487 for 374 contacts (41.4/contact) +
2D Compatibility (PS) -7108 + (NN) -2091 + (LL) 11700
1D Compatibility (HY) -3600 + (ID) 1050
Total energy: 13338.0 ( 35.66 by residue)
QMean score : 0.106

(partial model without unconserved sides chains):
PDB file : Tito_4GFR.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4GFR-query.scw
PDB file : Tito_Scwrl_4GFR.pdb: