Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDSAYVFDSEQATKLLMKNYELVKTSGVSFIDKRIRFLIARLFAGNNEVVNPERFNEINKEIKRQLGMFTALNGNVRASLVGLLMANNNASRESVQQVIANYNTLIQAGFQRTEYTYFAAYLLLESENPTKTAQKAKTIHQLFKKDHPFLTKSEDV-TTAVFLANLPEENTTELAEVTEYYFQEFAAKGFRKNDSLQFLATTGTLLYGEKDSKFIRRVDNIVEELRQKGIKVKPIHYSSIGILAFVMDGRKIDSGLVNLIDELQQQPGLRFGREFVTALAISLYTEKQSGQMSKEQLEGLMVNVHILIAMEQAAAVSAAAAASAAAASS------- |
1QOP Chain:A ((1-267)) | ------------MERYENLFAQLNDRR-------EGAFVPFVTLGDP---GIEQSLKIIDTLIDA-----------GADALELGVPFSDPLADGPTIQNANLRAFAAGVTPAQCFEMLAIIREKHPTIPIGLLMYANLVFNN--GIDAFYARCEQVGVDSVLVADVPVEESAPFRQAALRH-------------NIAPIFICPPNADDDLLRQVASYGRGYTYLLSRSGV-----------------TGAENRGPLHHLIEKLKEYHAAP------ALQGFGISSPEQVSAAVRAGAAGAISGSAIVKIIEKNLASPKQMLAELRSFVSAMKAASR |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QOP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -34529 for 2279 contacts (-15.2/contact) +
2D Compatibility (PS) -27402 + (NN) -4960 + (LL) 5624
1D Compatibility (HY) -800 + (ID) 1550
Total energy: -63617.0 ( -27.91 by residue)
QMean score : 0.243
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