Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRAAVLYENNVIKAEQIDEATCGKDQVRVEVKAVGICGSDIHKMQ-TRW---KYPLPAVMGHEFAGVITEIGSEVTNVAMGDRVAGIPLEPCMECNYCKAGDFALCDNYRMVGSHFHGGFAENVVMKADNVI-SIGDLDFEEGAMIEPLAVSMHGVLGIQPRLGDTVIVFGIGTIGILVVQCLLLAGVKDIIAVDISDKKLADAREFGCKYTINPKNEDLKERVFAYTNGLGADIALECAGSKITQEQCLLVTKKKGKVGFLGIAYADVLLHEEAFEN-IFRRELTLKGFWNSYSAPFPGEEWRTSIEFVKQGRIKLKPLISHRYK-LEETKEAFDMILSREHDYNKVMILPQKGDD |
2DFV Chain:A ((20-333)) | ---------------EVDVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIMGHEVAGEVVEIGPGVEGIEVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIFGVDTDGVFAEYAVVPAQNIWKNPKSIPPEYATLQEPLGNAVDTVLA-GPISGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADYVINPFEEDVVKEVMDITDGNGVDVFLEFSGAPKALEQGLQAVTPAGRVSLLGLYPGKVTID---FNNLIIFKALTIYGITGRHLW----ETWYTVSRLLQSGKLNLDPIITHKYKGFDKYEEAFEL-------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2DFV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -216708 for 2578 contacts (-84.1/contact) +
2D Compatibility (PS) -32902 + (NN) -8843 + (LL) 3044
1D Compatibility (HY) -18000 + (ID) 4950
Total energy: -278359.0 ( -107.97 by residue)
QMean score : 0.499
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