Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MESRSNKFGRKKNKKIGKLHKSYDAYLMELIEVTQENWHKQKVLMRKSFEYDPNLEYEEKKAEARYFYLFKEARTRQLKNK
3DYU Chain:A ((397-436))
----------QKCEAVGKFTKAMDDGVKELLTVGQEHWKRCTGPLPKEYQ-------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3DYU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 6231 for 158 contacts (39.4/contact) +
2D Compatibility (PS) -4154 + (NN) -1165 + (LL) 2928
1D Compatibility (HY) -2400 + (ID) 600
Total energy: 840.0 ( 5.32 by residue)
QMean score : 0.365
(partial model without unconserved sides chains):
PDB file :
Tito_3DYU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3DYU-query.scw
PDB file :
Tito_Scwrl_3DYU.pdb
: