Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPTNLIQLPGIGKKMVLMLNEIGIEEVADLRGRNPLELYEDTCDKRGERMDPCVLYTYRCAVYVAETDEAEQDVDLRKWWNWKDKQHTNERNLKNE
2DPI Chain:A ((238-283))
------EIPGIGYKTAKCLEALGINSVRDLQTFSP-------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2DPI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -11022 for 123 contacts (-89.6/contact) +
2D Compatibility (PS) -3247 + (NN) -2925 + (LL) 4692
1D Compatibility (HY) -2000 + (ID) 600
Total energy: -15102.0 ( -122.78 by residue)
QMean score : 0.577
(partial model without unconserved sides chains):
PDB file :
Tito_2DPI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2DPI-query.scw
PDB file :
Tito_Scwrl_2DPI.pdb
: