Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKIAAFDIGGTALKMGVVLPHGEIILT-KSAEISGSDG--DQILAEMKVFLAENTDVTGIAVSAPGYVNPKTGLITMGGAIRRFDNFNLKEWLEAETGLPVAIENDANCALLAEKWLGKGQDLDDFLCLTIGTGIGGGIFSNGELVRGGRFRAGEFGYMFSERPGAF----RPGKYTLNETTTMLV-LRRQYAELTGR-----------PLEEITGEEIFANYDAHDAVSERLITEFYTGICTGLYNLIYLFDPTHIFIGGGITSRPTFIAELKHHMESFGLRDTIIETATHKNQAGLLGAVYHFLQEENRHE
3VGM Chain:A ((7-269))-----VDIGGTKIAAGVVDEEGRILSTFKVATPPTAEGIVDAICAAV-AGASEGHDVEAVGIGAAGYVDDKRATVLFAPNI-DWRHEPLKDKVEQRVGLPVVVENDANAAAWGEYRFGAGQGHDDVICITLGTGLGGGIIIGNKLRRGRFGVAAEFGHIRVVPDGLLCGCGSQGCWEQYASGRALVRYAKQRANATPENAAVLLGLGDGSVDGIEGKHISEAARQGDPVAVDSFRELARWAGAGLADLASLFDPSAFIVGGGVSDEGELV-------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3VGM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -152449 for 1910 contacts (-79.8/contact) +
2D Compatibility (PS) -26399 + (NN) -16742 + (LL) 4336
1D Compatibility (HY) -10800 + (ID) 4200
Total energy: -206254.0 ( -107.99 by residue)
QMean score : 0.378

(partial model without unconserved sides chains):
PDB file : Tito_3VGM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3VGM-query.scw
PDB file : Tito_Scwrl_3VGM.pdb: