Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDNLIRLAEIFDVSLDEHVLAKTNEVKVERIYENKPLDLRKYNKIYWFIFRNIIRSLLIILAILTFL
3QQ6 Chain:A ((45-66))
-QFLEKVSAVLDVSVHTLLDEKHE-------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3QQ6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -6770 for 93 contacts (-72.8/contact) +
2D Compatibility (PS) -2323 + (NN) -202 + (LL) 4708
1D Compatibility (HY) -2000 + (ID) 250
Total energy: -6837.0 ( -73.52 by residue)
QMean score : 0.735
(partial model without unconserved sides chains):
PDB file :
Tito_3QQ6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3QQ6-query.scw
PDB file :
Tito_Scwrl_3QQ6.pdb
: