Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSKPNVVQLNNQYINDENLKKRYEAEELRRKNRLMGWVLIFVMLLFILPTYNLVKS-------YRTLQERRQEVVKLTKDYQTLTNRTENQKLLAKQLKNPDYVQKYARAKYYFSKTGEMIYPLPDLLPK
3UT4 Chain:A ((80-124))
------------------------------------WVIKLMIPYLIYPNKQLVKSELERLSSLEIINEDIREIVNLSKDYLHFYY--------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3UT4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -15179 for 172 contacts (-88.2/contact) +
2D Compatibility (PS) -3384 + (NN) 3851 + (LL) 5504
1D Compatibility (HY) -6000 + (ID) 750
Total energy: -15958.0 ( -92.78 by residue)
QMean score : 0.548
(partial model without unconserved sides chains):
PDB file :
Tito_3UT4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3UT4-query.scw
PDB file :
Tito_Scwrl_3UT4.pdb
: