Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKIAIDAMGGDYAPKAIVEGVNQAISDFSDIEVQLYGDQKKIEKYLTVTE---RVSIIHTEEK---------INSDDEPA-KAVR---------RKKQSSMVLGAKAVKDGVAQAFISA-GNTGALLAAGLFV------VGRIKGVDRPGLMSTMPTLDGVGFDMLDLGANA-----ENTASHLHQYAILGSFYAKNVRGIEVPRVGLL--N--------NGTEETKGDSLHKEAYELLAAEPSINFIGNIEARDLMSS----VADVVVT-DGFTGNAVLKTMEGTAMSIMGSLKSSIKSGGVKAKLGALLLKDSLYQLKDSMDYSSAGGAVLFGLKAPIVKCHGSSDSKAVYSTLKQVRTMLETQVVDQLVDAFTDE |
| 1YXO Chain:A ((15-275)) | ------------IGPDLCLLLARSA--Q--PHPLIAIASRTLLQERAGQLGLAIDLKDVSPAAWPERPAKAGQLYVWDTPLAAPVRPGQLDRANAAYVLETLTRAGQGCLDGHFAGMITAPVHKGVINEAGIPFSGHTEFLADLTHTAQV--VMMLATRG-LRVALATTHLPLREVADAISDERLTRVARILHADLRDKFGIAHPRILVCGLNPHAGEGGHLGREE---IEVIEPCLERLRG-EGLDLIGPLPADTLFTPKHLEHCDAVLAMYHDQGLPVLKYKGFGAAVNVTLGLPIIRTSVDHGTALDLAGSGRIDSGSLQVALETAYQMAASRC------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1YXO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -47465 for 1407 contacts (-33.7/contact) +
2D Compatibility (PS) -22905 + (NN) -5712 + (LL) 3352
1D Compatibility (HY) -7200 + (ID) 1800
Total energy: -81730.0 ( -58.09 by residue)
QMean score : 0.350
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