Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKLVKNLEIVESIFGDWDETIIWSCVQGIMGEVFVDSLDQPKSSLAKLGRKSSFGFLAGQPTLFLLEVCSGEDIILVPQHKGWSDLIESTYGQNAHSFKRYATKKDTL-FERSRLEKFVTQLPNGFELRAIDE--KVYNSCLEKEWSQDLVANYATYQYYKKQGIGYVVYYQGNIIAG-ASSY-STYKNGIEIE-VDTHPDFRRRGLATIVAAQLILT-CLD-KGIYPSWDAHTRTSLNLSEKLGYEFSHE-YIAYEID-- |
3EC4 Chain:A ((5-228)) | --------------------------DHPLDRPVWNSLGGPQSELDVASGNLRRLDPAYGPFAAAAPGAEAGLASLLQGDADEIWLVEPEPVAPPPGTRVIRVAPLLQMIADGPVPSFDDPGIVALGETDVPEMTALALATEPGPWASG-----------TWRYGQFYGVRIDGRLAAMAGERMRPAPNLAEVSGVCTWPEYRGRGLAARLIRKVIAGMAARGEVPYLHSYASNASAIRLYESLGFRARRAMTATLLGKST |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3EC4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -28467 for 1617 contacts (-17.6/contact) +
2D Compatibility (PS) -22277 + (NN) -4428 + (LL) 3600
1D Compatibility (HY) 2800 + (ID) 1600
Total energy: -50372.0 ( -31.15 by residue)
QMean score : 0.260
|
|
|