Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKMNKKVLLTSTMAASLLSVASVQAQETDTTWTARTVSEVKADLVKQDNKSSYTVKYGDTLSVISEAMSIDMNVLAKINNIADINLIYPETTLTVTYDQKSHTATSMKIETPATNAAGQTTATVDLKTNQVSVADQKVSLNTISEGMTPEAATTIVSPMKTYSSAPALKSKEVLAQEQAVSQAAANEQVSPAPVKSITSEVPAAKEEVKPTQTSVSQSTTVSPASVAAETPAPVAKVAPVRTVAAPRVASVKVVTPKVETGASPEHVSAPAVPVTTTSPATDSKLQATEVKSVPVAQKAPTATPVAQPASTTNAVAAHPENAGLQPHVAAYKEKVASTYGVNEFSTYRAGDPGDHGKGLAVDFIVGTNQALGNKVAQYSTQNMAANNISYVIWQQKFYSNTNSIYGPANTWNAMPDRGGVTANHYDHVHVSFNK |
2X75 Chain:A ((310-411)) | ------------------------------------------------------------------------------------RIMLPDVTIALDYALNRFTNIVDRLTVFEDNMRNNIDKTFGL------IFSQRVLLALINKGMVREEAYDKVQPKAMISWETKTPFRELIEQDESIT---TKEELDECFDPKHHLNQVDTIFERAGLA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2X75.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 3584 for 540 contacts (6.6/contact) +
2D Compatibility (PS) -9828 + (NN) 3012 + (LL) 20760
1D Compatibility (HY) -6400 + (ID) 1050
Total energy: 10078.0 ( 18.66 by residue)
QMean score : 0.168
|
|
|