Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKLLVVGSGGREHAIAKKLLASKDVDQVFVAPGNDGMTLD-GLDLVNIGISEHSRLIDFAKENEIAWTFIGPDDALAAGIVDDFNSAGLRAFGPTKAAAELEWSKDFAKEIMVKYNVPTAAYGTFSDFEKAKAYIEEQGAPIVVKADGLALGKGVVVAETVEQAVEAAQEMLLDNKFGDSGARVVIEEFLDGEEFSLFAFANGDKFYIMPTAQDHKRAFDGDKGPNTGGMGAYAPVPHLPQSVVDTAVETIIKPVLEGMIAEGRPYLGVLYAGLILTADG-PKVIEFNSRFGDPETQIILPRLTSDFAQNIDDIMMGIEPYIT-----WQKDGVTLGVVVASEGYPLDYEK-----GVPLPEKTDGDIITYYAGAKFAENSKALLSNGGRVYMLVTTEGSVKAGQDKIYTQLAQQ-DTTGLFYRNDIGSKAIK
3MJF Chain:A ((5-427))-NILIIGNGGREHALGWKAAQSPLADKIYVAPGNAGTALEPTLENVDIAATDIAGLLAFAQSHDIGLTIVGPEAPLVIGVVDAFRAAGLAIFGPTQAAAQLEGSKAFTKDFLARHNIPSAEYQNFTDVEAALAYVRQKGAPIVIKADGLAAGKGVIVAMTQEEAETAVNDMLAGNAFGDAGHRIVVEEFLDGEEASFIVMVDGENVLPMATSQDHKRVGDGDTGPNTGGMGAYSPAPVVTDDVHQRVMDQVIWPTVRGMAAEGNIYTGFLYAGLMISADGQPKVIEFNCRFGDPETQPIMLRMRSDL---VELCLAGTQGKLNEKTSDWDER-PSLGVVLAAGGYPADYRQGDVIHGLPQQEVKDGKV--FHAGTKLNGNHE-VVTNGGRV-LCVTALGETVAQAQQYAYQLAEGIQWEGVFCRKDIGYRAIA


General information:
TITO was launched using:
RESULT:

Template: 3MJF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -228837 for 3648 contacts (-62.7/contact) +
2D Compatibility (PS) -44879 + (NN) -19287 + (LL) 712
1D Compatibility (HY) -30800 + (ID) 9950
Total energy: -333041.0 ( -91.29 by residue)
QMean score : 0.558

(partial model without unconserved sides chains):
PDB file : Tito_3MJF.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3MJF-query.scw
PDB file : Tito_Scwrl_3MJF.pdb: