Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKNFKITRTHLEILSLIIIVVFGLSVFTLTTSSQGVLSYDGGKIKYVGSIVNHHMTGKGKL--TY--ENGDY-------YKG--DFVNGVFEGKGTFVSVHGWSYTGDFKKGQPDGQGRLNAKNKKVYKGTFKQGIYQK
2C42 Chain:A ((448-538))
--------------------------------AQGYFSYDSKKSG--GITISHLRFGEKPIQSTYLVNRADYVACHNPAYVGIYDILEGIKDG-GTFVLNSPWSSLEDMDKHLPSGIKRTIA-NKKLKFYNIDAVKIAT
General information:
TITO was launched using:
RESULT:
Template:
2C42.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 4544 for 376 contacts (12.1/contact) +
2D Compatibility (PS) -8449 + (NN) -3754 + (LL) 3792
1D Compatibility (HY) -3600 + (ID) 1650
Total energy: -9117.0 ( -24.25 by residue)
QMean score : -0.079
(partial model without unconserved sides chains):
PDB file :
Tito_2C42.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2C42-query.scw
PDB file :
Tito_Scwrl_2C42.pdb
: