Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNLLIMGLPGAGKGTQAAKIVEEFGVAHISTGDMFRAAMANQTEMGRLAKSYIDKGELVPDEVTNGIVKERLAEDDIAEKGFLLDGYPRTIEQAHALDATLEELGLRLDGVINIKVDPSCLIERLSGRIINRKTGETFHKVFNPP-----VDYKEEDYYQREDDKPETVKRRLDVNIAQGEPILEHYRKLGLVTDIEGNQEITEVFADVEKALLELK
2OO7 Chain:A ((1-215))
MNLVLMGLPGAGKGTQGERIVEDYGIPHISTGDMFRAAMKEETPLGLEAKSYIDKGELVPDEVTIGIVKERLGKDD-CERGFLLDGFPRTVAQAEALEEILEEYGKPIDYVINIEVDKDVLMERLTGRRICSVCGTTYHLVFNPPKTPGICDKDGGELYQRADDNEETVSKRLEVNMKQIQPLLDFYSEKGYLANVNGQRDIQDVYADVKDLLGGL-
General information:
TITO was launched using:
RESULT:
Template:
2OO7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -65927 for 1639 contacts (-40.2/contact) +
2D Compatibility (PS) -22826 + (NN) -11340 + (LL) 268
1D Compatibility (HY) -22800 + (ID) 6150
Total energy: -128775.0 ( -78.57 by residue)
QMean score : 0.513
(partial model without unconserved sides chains):
PDB file :
Tito_2OO7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2OO7-query.scw
PDB file :
Tito_Scwrl_2OO7.pdb
: