Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRDFEELFDKVKPIVMKLRRNYFVQLWEYDDWIQEGRIVLFRLLEEHPYLLDNESKLFIYFKTKFSNYLNDVLRHQDCQKRQFNKMPYEEISEVSHYVKSKGLVLDD--YIAYRDTLTKVEETLSDIDKEKF-EKLISGERFAGKKQFIRDIQPFFNAFKAD |
2C5K Chain:T ((9-88)) | --------------------------------------------------------------------------------QQVVKDTKEQLNRINNYITRHNTA--DDQEEEIQDILKDVEETIVDLDRSIIVMKRDENEDVSGREAQVKNIKQQLDALKLR |
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General information:
TITO was launched using:
| RESULT:
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Template: 2C5K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -5048 for 400 contacts (-12.6/contact) +
2D Compatibility (PS) -7694 + (NN) 318 + (LL) 7016
1D Compatibility (HY) -2400 + (ID) 950
Total energy: -8758.0 ( -21.90 by residue)
QMean score : 0.463
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