Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSKVRGFELVSQFSNKELLPKRETAHAAGYDLKVA--KKTVIEPGEITLVPTGIKAHMQPGEVL-YLYDRSSNPRKKGIVLINSVGVIDGDYYNNQVNEGHIFAQMQNITDQAVILEEGERIVQAVFAPFLLA-----DDDQATGMRTGGFGSTGK
3TQZ Chain:A ((23-141))
------------------LPAYATTGSAGLDLRACLDEPLKIEPDETCLISTGLAIYLGHSNVAATILPRSGLGHKHGIVLGNLVGLIDSDY------QGPLMVSCWNRGKEPYTINPGDRIAQLVVLPILKAQFAVVEEFEL-------------
General information:
TITO was launched using:
RESULT:
Template:
3TQZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -44920 for 705 contacts (-63.7/contact) +
2D Compatibility (PS) -11920 + (NN) -3841 + (LL) 1364
1D Compatibility (HY) -7200 + (ID) 1950
Total energy: -68467.0 ( -97.12 by residue)
QMean score : 0.372
(partial model without unconserved sides chains):
PDB file :
Tito_3TQZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3TQZ-query.scw
PDB file :
Tito_Scwrl_3TQZ.pdb
: