Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKFGKKLGFLALLMSIVLILGACGKTGLGNSTGNSTKNVTKKSAKNLKLGVSISTTNNPYFVAMKDGIDKYASNKKISIKVADAQDDAARQADDVQNFISQNVDAILINPVDSKAIVTAIKSANNANIPVILMDRG-SEGGKVLTTVASDNVAAGKMAADYAVKKLGKK---AKAF---ELSGVPGASATVDRGKGFHSVA--KSKLDILSSQSANFDRAKALNTTQNMIQGHKDVQIIFAQNDEMALGAAQAVKSAGLQNVLIVGIDGQPDAHDAIKKG-DISATIAQQPAKMGEIAIQAAIDHYKGKKVEKETIS-PIYLVTKDNVEKYNW |
| 2FN9 Chain:A ((3-281)) | -----------------------------------------------KMAIVISTLNNPWFVVLAETAKQRAEQLGYEATIFDSQNDTAKESAHFDAIIAAGYDAIIFNPTDADGSIANVKRAKEAGIPVFCVDRGINARGLAVAQIYSDNYYGGVLAGEYFVKFLKEKYPDAKEIPYAELLGILSAQPTWDRSNGFHSVVDQYPEFKMVAQQSAEFDRDTAYKVTEQILQAHPEIKAIWCGNDAMALGAMKACEAAGRTDIYIFGFDGAEDVINAIKEGKQIVATIMQFPKLMARLAVEWADQYLRGERSFPEIVPVTVELVTRE------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2FN9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -92229 for 2292 contacts (-40.2/contact) +
2D Compatibility (PS) -29162 + (NN) -13641 + (LL) 2900
1D Compatibility (HY) -21600 + (ID) 4950
Total energy: -158682.0 ( -69.23 by residue)
QMean score : 0.550
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