Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTRKIGIIGMGHVGSTVAHALIAQGIGDDYVFIDTNIDKVNADMIDFQDALANATYHANIVLNDYDALSDADVVISALGDISLQNNKEANRFAELPFTSKEVYDVSQKLKSSGFRGILIVVTNPVDAITQLYQEYTQFPKSRVIGTGTLLDTARMKRVLGQRLQVDPRSIGGYNLGEHGNSQFVAWSQVTVKGQPAISLLKAEELEQIKEASL--------KGGHTVFFGKKYTSYGIATAAVRIVLAVLNDSHELLPVSTFYESE----GVYLGYPAIIGRVGIVERISLSLSPKEEQQLTDSAAFIRNYLKHINL
3VKU Chain:A ((10-312))--QKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALP-FTSPKKIYSAEYSDAKDADLVVITAG--AP-----------------ILKSIVDPIVDSGFNGIFLVAANPVDILTYATWKLSGFPKNRVVGSGTSLDTARFRQSIAKMVNVDARSVHAYIMGEHGDTEFPVWSHANIGGVTIAEWVKAH--PEIKEDKLVKMFEDVRNKAYEIIKLKGATFYGIATALARISKAILNDENAVLPLSVYMDGQYGLNDIYIGTPAVINRNGIQNILEIPLTDHEEESMQKSASQLKKV------


General information:
TITO was launched using:
RESULT:

Template: 3VKU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -201051 for 2345 contacts (-85.7/contact) +
2D Compatibility (PS) -29582 + (NN) -10033 + (LL) 2100
1D Compatibility (HY) -18000 + (ID) 5050
Total energy: -261616.0 ( -111.56 by residue)
QMean score : 0.560

(partial model without unconserved sides chains):
PDB file : Tito_3VKU.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3VKU-query.scw
PDB file : Tito_Scwrl_3VKU.pdb: