Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTVKINTRDGQIELSDDVIATVVGGSATEIFGVVGMASKSAIKDNFQALLRKENYAKGVVVRSSEAGIAVDVYTVMSYGVKISEVSKNIQERVKFNLENQLGLSADMVNVYVQSIKVVGED
3J1Z Chain:P ((237-291))
-----------------------------------------------------------RTRQAGKTVFIQFHLELDGNLSLNE-AHSITDTTGLRVKAAFED--AEVIIHQDPVQVEPTT
General information:
TITO was launched using:
RESULT:
Template:
3J1Z.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -22403 for 313 contacts (-71.6/contact) +
2D Compatibility (PS) -5885 + (NN) -411 + (LL) 4428
1D Compatibility (HY) -1600 + (ID) 250
Total energy: -26121.0 ( -83.45 by residue)
QMean score : 0.387
(partial model without unconserved sides chains):
PDB file :
Tito_3J1Z.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3J1Z-query.scw
PDB file :
Tito_Scwrl_3J1Z.pdb
: