Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAKQKNNWRRVGVGVLTLASVATLAACGSKSASQDSNGAINWAIPTEINTLDLSKVTDTYSNLAIGNSSSNFLRLDKDGKTRPDLATKVDVSKDGLTYTATLRKGLKWSDGSKLTAKDFVYSWQRLVDPKTASQYAYLAVEGHVLNADKINEGQEKDLNKLGVKAEGDDKVVITLSSPSPQFIYYLAFTNFMPQKQEVVEKYGKDYATTSKNTVYSGPYTVEGWNGSNGTFTLKKNKNYWDAKNVKTKEVRIQTVKKPDTAVQMYKRGELDAANISNTSAIYQANKNNKDVTDVLEA----TTAYMQYNTTGSVKGLDNVKIRRALNLATNRKGVVQAAVDTGSKPAIAFAPTGLAKTPDGTDLAKYVAP-GYEYNKTEAAKLFKEGLAESGLTKLK------LTITADADVPAAKNSVDYIKSTWEAALPGLTVEEKFVTFKQRLEDSRKQNFDIVVSVWGGDYPEGSTFYGLFKSDSQNNDGKFANKDYDAAYNKAISEDALKPEESAKD---YKEAEKILFEQGAYNPLYFRSGKGLQNPKLKGVIRNTTGLSIDFTHAYKK |
| 1B3G Chain:A ((21-497)) | ---------------------------------------------SEVQSLDPHKIEGVPESNVSRDLFEGLLISDVEGHPSPGVAEKWE-NKDFKVWTFHLRENAKWSDGTPVTAHDFVYSWQRLADPNTASPYASYLQYGHIANIDDIIAGK-KPATDLGVKALDDHTFEVTLSEPVPYFYKLLVHPSVSPVPKSAVEKFG-DKWTQPANIVTNGAYKLKNW-VVNERIVLERNPQYWDNAKTVINQVTYLPISSEVTDVNRYRSGEIDMT--YNNMPIELFQKLKKEIPNEVRVDPYLCTYYYEINNQKA--PFNDVRVRTALKLALDRDIIVNKVKNQGDLPAYSY-------TPPYTDGAKLVEPEWFKWSQQKRNEEAKKLLAEAGFTADKPLTFDLLYNTSDLH----KKLAIAVASIWKKNL-GVNVNLENQEWKTFLDTRHQGTFDVARAGWCADYNEPTSFLNTMLSDSSNNTAHYKS----PAFDKLIA-DTLKVADDTQRSELYAKAEQQLDKDSAIVPVYYYVNARLVKPWVGGYTGKDPLDNIYVKNLYII |
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General information:
TITO was launched using:
| RESULT:
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Template: 1B3G.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -25011 for 3860 contacts (-6.5/contact) +
2D Compatibility (PS) -49700 + (NN) -21423 + (LL) 4040
1D Compatibility (HY) -22000 + (ID) 7750
Total energy: -121844.0 ( -31.57 by residue)
QMean score : 0.452
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