Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIKYILKRVAILLVTLWVVITLSFFLMQILPGTPYNNPKLTEEMIALLNKQYGLDKPVWQQYLTYLWNVLHGDFGTSYQSVNQPVSRMISLRLGVSVHLGVQALVFGVLGGILVGAISARHKNDKVDGILSVIATLGISMPSFIIGILLLDYFGFKWNLLPLS---GWGTFSQTILPSLALGLPTLASVSRFFRSEMIETLNSDYVQLARSKGMTIRQVTRKHAYRNSMIPILTLIGPLAAGLLTGSALIEQIF-SIPGIGQQFVTSIPTKDYPVIMGTTIVYAVMLMVAILITDVVISIVDPRVRLQ |
3D31 Chain:C ((78-283)) | --------------------------------------------------------------------------------------RSVISSIFLSLYAGFLATLLALLLGAPTGYILARFD-FPGKRLVESIIDVPVVVPHTVAGIALLTVFGSR-GLIGEPLESYIQFRDALPGIVVAMLFVSMPYLANSAREGFKSV-DPRLENAARSLGAPLWKAFFFVTLPLSARYLLIGSVMTWARAISEFGAVVILAYYPMVGPTLIYDRFISYGLSASRPIAVLLILVTLSIFLVIR------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3D31.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -154390 for 1586 contacts (-97.3/contact) +
2D Compatibility (PS) -20990 + (NN) -2082 + (LL) 8884
1D Compatibility (HY) -5200 + (ID) 1450
Total energy: -175228.0 ( -110.48 by residue)
QMean score : 0.263
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