Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLLDMLSYDFMQRALLAVVAISIFAPILGIFLILRRQSLMSDTLSHVSLAGVALGVVLGISPTWSTIFVVTLAAVVLEYLRTVYKHYMEISTAILMSMGLAISLIVMSKAHNVGNVSLEQYLFGSIITIGKEQVIALFVIALITFILTILFIRPMYILTFDEDTAFVDGLPVRTMSILFNVVTGIAIALTIPAAGALLVSTIMVLPASIAMRLGRNFKTVIFLGMLIGFVGMVAGIFLSYYWETPASATITMIFIGIFLLVSLVGLLRKR |
| 1JB0 Chain:M ((3-28)) | --------------------------------------------------------------------------------------------------------------------------------LTDTQVYVALVIALLPAVLAFRLSTELYK----------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1JB0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -10846 for 99 contacts (-109.6/contact) +
2D Compatibility (PS) -2881 + (NN) -2324 + (LL) 23692
1D Compatibility (HY) -3200 + (ID) 350
Total energy: 4091.0 ( 41.32 by residue)
QMean score : 0.559
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