Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKLSKQLYKSLPLLTVVLCVGALQQNVEAKAKHYKTTSHVETQYVSTSSKKILPFTHNKQIKVGPLDNLGRATYSHIQLRDADEPKIKRERLTYNPTGWHNYKFTTEKGKTTWLMDRGHLVGYQFSGMNNVPENLVTMTKYLNTGFSENNPDGMLYYENRLDSWLANHKNFWLDYKVTPIYEGNNLVPSRVELQYVGIDKQGKLLEIKLGGGKEQTDEYGVTTVTLENTSPLAKIDYKTGMLIKEDGKQAEEGEDPNSDADENEAAIESASDIEENTNTNTSESDTNNVAPKNRIVYVANKGRSNTYWY-----SLENIKNANTANIVQMTEQEALNQHKHHSTTEAQ |
1YAL Chain:A ((10-59)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KGAVTPVKNQGACGS-WAFSTIATVEGINKIVTGNLLELSEQELVDCDKHSYGCKGG |
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General information:
TITO was launched using:
| RESULT:
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Template: 1YAL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 12962 for 203 contacts (63.9/contact) +
2D Compatibility (PS) -4767 + (NN) -1909 + (LL) 15528
1D Compatibility (HY) -2400 + (ID) 700
Total energy: 18714.0 ( 92.19 by residue)
QMean score : 0.209
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