Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTETLLSIKDLSITFTQYGRFLKPFQSTPIQALNLEIKKGELLAIIGASGSGKSLLAHAIMDILPKNASVTGDMIYRGQSLNSK--RIKQLRGKDITLIPQSVNYLDPSMKVKH-------QVRLGISENSKATQEGLFQQFGLKESDGDLYPFQLSGGMLRRVLFTTCISDKVSLIIADEPTPGLHPDALQMVLDQLRSFADKGISVIFITHDIVAASQIADRITIFKEGKAIETA-PASFFSGNGEQLQTEFARSLLRSLPQQEFLKGVTHDLRG
2OUK Chain:A ((40-247))
-----------------------------LKGINVHIREGEVVVVIGPSGSGKSTFLRCL-NLLEDFDE--GEIIIDGINLKAKDTNLNKVR-EEVGMVFQRFN-LFPHMTVLNNITLAPMKVRKWPREKAEAKAMELLDKVGLKDK-AHAYPDSLSGGQAQRVAIARALAMEPKIMLFDEPTSALDPEMVGEVLSVMKQLANEGMTMVVVTHEMGFAREVGDRVLFMDGGYIIEEGKPEDLFDRPQHERTKAFLSKVF------------------
General information:
TITO was launched using:
RESULT:
Template:
2OUK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -128956 for 1521 contacts (-84.8/contact) +
2D Compatibility (PS) -21575 + (NN) -12852 + (LL) 3320
1D Compatibility (HY) -18000 + (ID) 3050
Total energy: -181113.0 ( -119.07 by residue)
QMean score : 0.511
(partial model without unconserved sides chains):
PDB file :
Tito_2OUK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2OUK-query.scw
PDB file :
Tito_Scwrl_2OUK.pdb
: