Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEISLLTDIGQRRSNNQDFINQFENKAGVPLIILADGMGGHRAGNIASEMTVTDLGSDWAETDFSELS-EIRDWMLVSIETENRKIY-ELGQSDDYKGMGTTIEAVAIVGDNIIFAHVGDSRIGIVRQGEYHLLTSDHSLVNELVKAGQLTEEEAASHPQKNIITQSIGQANPVEPDLGVHLLEEGDYLVVNSDGLTNMLSNADIATVLTQEKTLDDKNQDLITLANHRGGLDNITVALVYVESEAV
1TXO Chain:A ((11-236))
------SDRGLVRANNEDSV-----YAGARLLALADGMGGHAAGEVASQLVIAAL----AHLDDDEPGGDLLAKLDAAVRAGNSAIAAQVEMEPDLEGMGTTLTAILFAGNRLGLVHIGDSRGYLLRDGELTQITKDDTFVQTLVDEGRITPEEAHSHPQRSLIMRAL-TGHEVEPTLTMREARAGDRYLLCSDGLSDPVSDETILEAL-QIPEVAESAHRLIELALRGGGPDNVTVVVADLEH---
General information:
TITO was launched using:
RESULT:
Template:
1TXO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -78988 for 1920 contacts (-41.1/contact) +
2D Compatibility (PS) -24029 + (NN) -8716 + (LL) 1016
1D Compatibility (HY) -12000 + (ID) 4150
Total energy: -126867.0 ( -66.08 by residue)
QMean score : 0.478
(partial model without unconserved sides chains):
PDB file :
Tito_1TXO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1TXO-query.scw
PDB file :
Tito_Scwrl_1TXO.pdb
: