Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKRIKPNKKRELLKAKGINWKDVRLSQTLQEVASPKKKAPEAPKAVDLLEGLTANKQDVLKEAGLVSLEAFAKVSEADVLALKGIGPAAIKQLVDNGVVFAK
1U9L Chain:A ((7-56))
---------------------------------------------TFTKYLDIDEDFATVLVEEGFSTLEELAYVPMKELLEIEGLDEPTVEALRERAKNALA
General information:
TITO was launched using:
RESULT:
Template:
1U9L.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -25960 for 299 contacts (-86.8/contact) +
2D Compatibility (PS) -5070 + (NN) 1554 + (LL) 3164
1D Compatibility (HY) -4800 + (ID) 550
Total energy: -31662.0 ( -105.89 by residue)
QMean score : 0.721
(partial model without unconserved sides chains):
PDB file :
Tito_1U9L.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1U9L-query.scw
PDB file :
Tito_Scwrl_1U9L.pdb
: