Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKVRYGVVSTAKVA-PRFIEGVRLAGNGEVVAVSSRTLESAQAFANKYHLPKAYDKLEDMLADESIDVIYVATINQDHYKVAKAALLAGKHVLVEKPFTLTYDQANELFALAESCNLFLMEAQKSVFIPMTQVIKKLLASGEIGEVISISSTTAYPNIDHVTWFRELELGGGTVHFMAPYALSYLQY-LFDATITHASGTATFPKGQSDSQSKLLLQLSNGVLVDIFLTTRLNLPHEMIIYGTEGRLII-----PHFWKTTHAKLV-RNDTSARTIQVDMVSDFEKEAYHVSQMILEGQRVSHIMTPQLTLSGVKIIEDLYRSWGK |
| 4HAD Chain:A ((22-341)) | -SMLRFGIISTAKIGRDNVVPAIQDAENCVVTAIASRDLTRAREMADRFSVPHAFGSYEEMLASDVIDAVYIPLPTSQHIEWSIKAADAGKHVVCEKPLALKAGDIDAVIAARDRNKVVVTEAYMITYSPVWQKVRSLIDEGAIGSLRHVQGAFTYFNRDA------------GLPDIGVYPVMSTRFSTGKEPLRIQANTERDPDFGTDIYSSVKADFDDFEL-SFYVSTQMANRQIMVFHGTNGYIEVKSPFNANRWGPEEIELADRSHNESRIFRFQDSRQYRREVEAFARAVENGK--EEVVTLENSKLNQKVIDAIYRASEK |
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General information:
TITO was launched using:
| RESULT:
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Template: 4HAD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -218715 for 2511 contacts (-87.1/contact) +
2D Compatibility (PS) -31755 + (NN) -8993 + (LL) 1368
1D Compatibility (HY) -14800 + (ID) 3500
Total energy: -276395.0 ( -110.07 by residue)
QMean score : 0.517
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