Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKRLHKLFITVIATLGMLGVMTFGLPTQPQNVTPIVHADVNSSVDTSQEFQNNLKNAIGNLPFQYVNGIYELNNNQTNLNADVNVKAYVQN---TIDNQQRPSTANAMLDRTIRQYQNRRDTTLPDANWKPLGWHQVAT-NDHYGHAVDKGHLIAYALAGNFKGWDASVSNPQNVVTQTAHSNQSNQKINRGQNYYESLVRKAVDQNKRVRYRVTPLYRNDTDLVPFAMHLEAKSQDGTLEFNVAIPNTQASYTMDYATGEITLN |
3OWV Chain:B ((49-246)) | ------------------------------------------------------------------SGAFIVNGNKTNLDAKVSSKPYADNKTKTVGKETVPTVANALLSKATRQYK--------STSWTPPGWHQVKNLKGSYTHAVDRGALLGYALIGGLDGFDASTSNPKNIAVQTAWANQAQAEYSTGQNYYESKVRKALDQNKRVRYRVTLYYASNEDLVPSASQIEAKSSDGELEFNVLVPNVQKGLQLDYRTGEVTVT |
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General information:
TITO was launched using:
| RESULT:
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Template: 3OWV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -33587 for 1514 contacts (-22.2/contact) +
2D Compatibility (PS) -19618 + (NN) -4243 + (LL) 4684
1D Compatibility (HY) -13200 + (ID) 4950
Total energy: -70914.0 ( -46.84 by residue)
QMean score : 0.381
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