Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSDVVEKQTAKSFIMNVLNGLALGTVIVLIPGAILGELMKALLPMWSGFATLIAATAVATSMMGLVIGIMVGLNFKFNPIQSASLGLAVMFAGGAATFLKGAIMLKGTGDIINMGITAALGVLLIQFLSDKTKSFTLIVIPTVTLLLVGGVGHVLLPYVKMITTMIGQGIASLLGLQPVLMSILIAMIFCFLIVSPITTVGIALAISLSGIGSGAANLGICAASFGLCMAGWSVNSKGTALAHVL---GSPKISMANVLAKPKIMLPMISSAAILGILGALFNIQGTPASAGFGISGLIGPINALNLAKGGWSVMNMLLIIIIFVAAPIILNFIFNYLFIKVLKIIDPMDYKLDI
3D23 Chain:B ((106-150))----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GNVKPGETFTVLAAYNGRPQGAFHVTMRSSYTIKGSFLCGSCGSVGYVLTGDSVKFVYMHQLELSTGCHTGTDFTGNFYGPYRDAQVVQLPVKDYVQTVNVIAWLYAAILNNCAWFVQNDVCS


General information:
TITO was launched using:
RESULT:

Template: 3D23.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -9552 for 198 contacts (-48.2/contact) +
2D Compatibility (PS) -4464 + (NN) -5 + (LL) 19368
1D Compatibility (HY) 0 + (ID) 150
Total energy: 5197.0 ( 26.25 by residue)
QMean score : -0.202

(partial model without unconserved sides chains):
PDB file : Tito_3D23.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3D23-query.scw
PDB file : Tito_Scwrl_3D23.pdb: