Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSEFTFEIVEKLLVLSENEKGWTKELNRVSFNGAPAKFDLRTWSPD--H-TKM-GKGITLSNEEFKVILDAFRK
1PCF Chain:A ((68-118))
---------------------KMRYVSVRDFKG-KVLIDIREYWMDPEGEMKPGRKGISLNPEQWSQLKEQIS-
General information:
TITO was launched using:
RESULT:
Template:
1PCF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 4093 for 230 contacts (17.8/contact) +
2D Compatibility (PS) -4809 + (NN) 1232 + (LL) 2188
1D Compatibility (HY) -2000 + (ID) 550
Total energy: 154.0 ( 0.67 by residue)
QMean score : 0.299
(partial model without unconserved sides chains):
PDB file :
Tito_1PCF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1PCF-query.scw
PDB file :
Tito_Scwrl_1PCF.pdb
: