Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIKNSTLTKLTRVAILSALCVVLRYAFAPLPNIQPITAIFLITVVLFDLKEGVATVTITMLVSSFLMGFGPWVFLQIISFTLILCLWKFLIYPLTKAVCFGKITEVVLQTFFAGGLGVVYGVIIDTCFAWLYHMPWWTYVLAGLSFNMAHALSTCLFYPLLLPILRRFRNEKIH |
2WWB Chain:B ((47-58)) | ---------------MGFIGFFVKLIHIPINNIIVGG----------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2WWB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -3407 for 39 contacts (-87.4/contact) +
2D Compatibility (PS) -1185 + (NN) -600 + (LL) 14324
1D Compatibility (HY) -1600 + (ID) 0
Total energy: 7532.0 ( 193.13 by residue)
QMean score : -0.376
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