Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKTYEKIYQILSKNN-NFISGETMANQLNISRTAIWKGIKTLEELGLEIESVTNKGYRLVSGDILLPEQLEQEIGIKVSLNNNSA------------STQLDAKMGIESKLKTPHLFLAPNQKKAKGRFDRPFFTSNQGGIYMSLLLQPNVPIEDIKPYTVMVASSAVKAISRLTGITPEIKWVNDIYLDNKKIAGILTEAIASVESGLVTNVIIGLGINF--YIKEFPRALTKRAGSL-FTEQPTITRNQ----LITEI---WNLFFNIPLEDHLKVYREKSLVLDKTVSFMDGQTMYSGKAIDITDKGYLVVELDDGQLKTLRSGEISLSSW
3V8L Chain:A ((9-329))-KYSQDVLQLLYKNKPNYISGQSIAESLNISRTAVKKVIDQLKLEGCKIDSVNHKGHLLQQ----LPDIWYQ--GIIDQYTKSSALFDFSEVYDSIDSTQLAAKKSLVGN-QSSFFILSDEQTKGRGRFNRHWSSSKGQGLWMSVVLRPNVAFSMISKFNLFIALGIRDAIQHFSQDEVKVKWPNDIYIDNGKVCGFLTEMVANNDG--IEAIICGIGINLTQQLENFDESIRHRATSIQLHDKNKLDRYQFLERLLQEIEKRYNQFLTLPFSEIREEYIAASNIWNRTLLFTENDKQFKGQAIDLDYDGYLIVRDEAGESHRLISADIDF---


General information:
TITO was launched using:
RESULT:

Template: 3V8L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -130682 for 2200 contacts (-59.4/contact) +
2D Compatibility (PS) -31420 + (NN) -8204 + (LL) 928
1D Compatibility (HY) -26400 + (ID) 5300
Total energy: -201078.0 ( -91.40 by residue)
QMean score : 0.486

(partial model without unconserved sides chains):
PDB file : Tito_3V8L.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3V8L-query.scw
PDB file : Tito_Scwrl_3V8L.pdb: