Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKIMFVAAEGAPFAKTGGLGDVIGALPKSLSKKGHDVVVVMPYYDMVDQKFGDQIENLMYFYTDVGWRHQYVGVKRLSQDNVTFYFIDNQYYFYRGHVYGDWDDGE-RFAYFQLAALELMEKIN----------FIPDVLHV-HDYHTAMIPFLLKEKYHWIQAYNNIRTVFTIHNIEFQGQFG----PEM-LGDLFGVGAERYEDG--TLRWNNCLNWMKAAILYSDRVTTVSPSYANE-IKTPEFGKGLDQIMRMEAGKLSGIVNGIDSDLLNPETDAFLPYHF-SKSNLEGKIKNKLALQENLGLPQDKNVPLIGIVSRLTDQKGFDIIASELDNMLQQDIQMVILGTGYHHFEETFSYFASRYPEKLSANITFDLRLAQQIYAASDIFMMPSAFEPCGLSQMMAMRYGSLPLVHEVGGLKDTVVAFNQFDGSGTGFSFNHFSGYW----------LMQTLKLALEVYNDYPEAWKKLQWQAMSKDFSWDTACVAYEQLYQQLQ |
| 3VUE Chain:A ((10-507)) | MNVVFVGAEMAPWSKTGGLGDVLGGLPPAMAANGHRVMVISPRYD----QYKDAWDTSVVAEIKVADRYERVRFFHCYKRGVDRVFIDHPSFLEK-------KDNQMRFSLLCQAALEAPRILNLNNNPYFKGTYGEDVVFVCNDWHTGPLASYLKNNYQPNGIYRNAKVAFCIHNISYQGRFAFEDYPELNLSERFRSSFD-FIDGYDTPVEGRKINWMKAGILEADRVLTVSPYYAEELISGIARGCELDNIMRLTG--ITGIVNGMDVSEWDPSKDKYITAKYDATTAIEAKALNKEALQAEAGLPVDRKIPLIAFIGRLEEQKGPDVMAAAIPELMQEDVQIVLLGTGKKKFEKLLKSMEEKYPGKVRAVVKFNAPLAHLIMAGADVLAVPSRFEPCGLIQLQGMRYGTPCACASTGGLVDTVIE------GKTGFHMGRLSVDCKVVEPSDVKKVAATLKRAIKVVGT--PAYEEMVRNCMNQDLSWKGPAKNWENVLLGLG |
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General information:
TITO was launched using:
| RESULT:
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Template: 3VUE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -286082 for 3969 contacts (-72.1/contact) +
2D Compatibility (PS) -49529 + (NN) -27405 + (LL) 508
1D Compatibility (HY) -34400 + (ID) 8700
Total energy: -405608.0 ( -102.19 by residue)
QMean score : 0.537
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