Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MITGIINLKKEAGMTSHDAVFKLRKILHTKKIGHGGTLDPDVVGVLPIAVGKATRVIEYMTESGKIYEGEITLGYATSTEDSSGEVISRTPLTQSDLSEDVVDHAMKSFTGPITQVPPMYSAVK--VNGKKLYEYARSGEEVERPKRQITISEFRRTSPLYFEKGICRFSFYVSCSKGTYVRTLAVDLGIKLGYASHMSFLKRTSSAGLSITQSL-TLEEINEKY--KQED------FSFLLPIEYGVLDLPKVNLTEEDKVEISYGRRILLENEADTLAAFYENRVIAILEKRGNEFKPHKVLL |
| 3HAY Chain:A ((47-290)) | ---GVINLDKPPGPTSHEVVAWIKKILNLEKAGHGGTLDPKVSGVLPVALEKATRVVQALLPAGKEYVALMHL--------------------HGDVPEDKIIQVMKEFEGEIIQRPPLRSAVKRRLRTRKVY--------------YIEVLEIEGRDVL----------FRVGVEAGTYIRSLIHHIGLALGVGAHMSELRRTRSGPFKEDETLITLHDLVDYYYFWKEDGIEEYFRKAIQPMEKAVEHLPKVWIKDSAVAAVTHGADLAVPGIAKLHAGIKRGDLVAIMTLKDELVALGKAMM |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3HAY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -102887 for 1652 contacts (-62.3/contact) +
2D Compatibility (PS) -24159 + (NN) -863 + (LL) 2668
1D Compatibility (HY) -16400 + (ID) 4600
Total energy: -146241.0 ( -88.52 by residue)
QMean score : 0.381
|
|
|