Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRESIFEETAKGKVSRHVLLTILLALILLFTADFLTYIIIELII-----SLDFWKLEWDSDIVQLIILLATSISTVMLFMWVKFKEKRPISSLGLFKEGALTELSRGWLVESVLFGACLILTIISGSGVIETVRFTADKLIWFLIFAVGWQVQSASVEILCRGWLLPVSATKYSKIVSVSISSIFFGLLHSANNHVSLISIFNLCLFGLFLSLYVILKGNIWGACGIHGAWNCVQGSVFGIEVSGEPMLSNSLVHVKTYGADWISGGKFGVEGSMITSIVLIVACYWLYQKSNFPYD |
1QLT Chain:A ((6-273)) | --EFRPLTLPPK-LSLSDFNEFIQDIIRIVGSENVEVISVDGSYMKPTHTHDPHHVMDQDYFLASAIVAPRNVADVQSIVGLANKFSFPLWPIS-------IGRNSGYGGAAPRVSGSVVLDM--GKNMNRVLEVNVEGA--YCVVEPGVTYHDLHNYLEANNLRDKLWLDVPDL----GGGSVLGNAVERGVGYTPYGDHWMM-----HSGMEVVLANGELLRTGMGALPDPKRPETMGLKPEDQPWSKIAHLFPYGFGPYIDGLFSQSNMG-IVTKIGIWL----------MPNP |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QLT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -281479 for 2123 contacts (-132.6/contact) +
2D Compatibility (PS) -26817 + (NN) 365 + (LL) 3224
1D Compatibility (HY) -3200 + (ID) 1200
Total energy: -309107.0 ( -145.60 by residue)
QMean score : 0.187
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