Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--MKQSNHRYHGPLIEFEIEYSYIKIFPWIGLFISCIGLYASNFGDPLGFIKFIFSVCIFVNLVSIIISLFLKKYLIF
3RA3 Chain:B ((3-27))
RRLKQKNARLKQEIAALEYEIAALE-----------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3RA3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 1010 for 82 contacts (12.3/contact) +
2D Compatibility (PS) -2303 + (NN) 758 + (LL) 4684
1D Compatibility (HY) -2000 + (ID) 300
Total energy: 1849.0 ( 22.55 by residue)
QMean score : -0.139
(partial model without unconserved sides chains):
PDB file :
Tito_3RA3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3RA3-query.scw
PDB file :
Tito_Scwrl_3RA3.pdb
: