Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKQKLLLLIGGLLIMIMMTACKDSKIPENRTKEEYQAEQNFKLFFEFLAQKYKDLNKIQKYLLLVSDSGDALDLEYFYSIQDLKKNKDLGKFETRKSQIEKPGGYNELENKEVPFEYFKNNIVYPKGKPNITFDDFIIGAMDTKELKKLKVKSYLLKHPETELKDITYELPTQSKLIKK |
| 2INY Chain:A ((748-774)) | --------------------VYNGYRFWPDRHYFHYDFLRNFDPMSRQGPNFLDTTLYDLVSSTPVVNDTGSQPSQDNVRNNSGFIAPRSWPVWTAQQGEAWPANWPYPLIGNDAISSNQTVNYKKFLCDNYLWTVPFSSDFMYMGELTDLGQNPMYTNNSHSMVINFELDPMDENTYVY |
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General information:
TITO was launched using:
| RESULT:
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Template: 2INY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 5395 for 93 contacts (58.0/contact) +
2D Compatibility (PS) -2736 + (NN) -1034 + (LL) 2520
1D Compatibility (HY) -1200 + (ID) 200
Total energy: 2745.0 ( 29.52 by residue)
QMean score : 0.156
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