Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAQIKLTPEELRSSAQKYTAGSQQVTEVLNLLTQEQAVIDENWDGSTFDSFEAQFNELSPKITEFAQLLEDINQQLLKVADIIEQTDADIASQISG
4J11 Chain:A ((4-88))
MAEIKITPEELERIAGNFKNAAGEAQSQINRLEGDINSLEGQWAGATQAKFRGEFIQSKQAMQQYIPILEGISTDLKRIADKFRN-----------
General information:
TITO was launched using:
RESULT:
Template:
4J11.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -6829 for 468 contacts (-14.6/contact) +
2D Compatibility (PS) -8933 + (NN) -480 + (LL) 488
1D Compatibility (HY) -4400 + (ID) 1150
Total energy: -21304.0 ( -45.52 by residue)
QMean score : 0.619
(partial model without unconserved sides chains):
PDB file :
Tito_4J11.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4J11-query.scw
PDB file :
Tito_Scwrl_4J11.pdb
: