Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEWQDLAQLPVSIFKDYVTDAQDAEKPFIWTEVFLREINRSNQEIILHIWPMTKTVILGMLDRELPHLELAKKEIISRGYEPVVRNFGGLAVVADEGILNFSLIIPDVFERKLSISDGYLIMVDFIRSIFSDFYQPIEHFEVETSYCPGKFDLSINGKKFAGLAQRRIKNGIAVSIYLSVCGDQKERSRMISDFYKIGLGDTGSPIAYPNVDPEIMANLSDLLDCPMTVEDVIDRMLISLKQVGFNDRLLMIRPDLVAEFDRFQAKSMANKGTVSRDE |
| 1VQZ Chain:A ((13-248)) | ----------MKYIINH---SNDTAFNIALEEYAFKHLLD--EDQIFLLWINKPSIIVGRH--QNTIEEINRDYVRENGIEVVRRISGGGAVYHDLNNLNYTIISKEDE----NKAFDFKSFSTPVINTLAQLGVKAE--------FTGRNDLEIDGKKFCGNAQAYINGRIMHHGCLLFDVDLSVLANALK----VS-KDKFESKGVKSV-RARVTNIINELPKKITVEKFRDLLLEYMKKEYPEMTEYVFSEEELAEINRIKDTKFGTWDWNYGKS |
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General information:
TITO was launched using:
| RESULT:
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Template: 1VQZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -164234 for 1782 contacts (-92.2/contact) +
2D Compatibility (PS) -25297 + (NN) -4626 + (LL) 2520
1D Compatibility (HY) -7200 + (ID) 2400
Total energy: -201237.0 ( -112.93 by residue)
QMean score : 0.373
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