Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTKQVQQSRELVLKEIMQSQGVTRTKACSILKELEEFGLFQFSDSGQFMLKVGA
3PQK Chain:A ((47-85))
--------GEFSVGELEQQIGIGQPTLSQQLGVLRESGIVETRRNIKQIFYRLT
General information:
TITO was launched using:
RESULT:
Template:
3PQK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -10297 for 171 contacts (-60.2/contact) +
2D Compatibility (PS) -4210 + (NN) -1411 + (LL) 848
1D Compatibility (HY) -800 + (ID) 400
Total energy: -16270.0 ( -95.15 by residue)
QMean score : 0.593
(partial model without unconserved sides chains):
PDB file :
Tito_3PQK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3PQK-query.scw
PDB file :
Tito_Scwrl_3PQK.pdb
: